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Messages - molatwork

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General discussions (Q&As) / Re: Building a DNA superhelix
« on: March 04, 2009, 03:55:42 am »
Dear Xiang-Jun,

Thank you for your answer.
The best clue I have found is an analysis of the superhelicity of DNA in nucleosomes. Here is the link:

http://www.cell.com/biophysj/fulltext/S0006-3495(08)70172-3

I have access to this paper if need it be.
My maths are just average, as my programming skills, but if you think that this could be a starting point and you believe I may help, please let me know.

Best regards,


Miguel

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General discussions (Q&As) / Building a DNA superhelix
« on: March 03, 2009, 09:58:48 am »
Dear 3DNA community,

I wonder if there is a way with 3DNA to generate superhelical DNA given a pitch and a diameter or if anyone could tell me another way of achieving it. I saw in the forum a message expressing interest in adding to 3DNA the capability of analysing superhelices, but nothing about building them.

Thank you very much in advance,


Miguel

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Funded by X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids (R24GM153869)

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University