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Questions and answers => General discussions (Q&As) => Topic started by: rwmolt on May 15, 2016, 08:08:15 pm

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Title: Criterion for Dinucleotide Step Being A-Like or B-Like
Post by: rwmolt on May 15, 2016, 08:08:15 pm

I am having difficulty ascertaining the criterion used to classify a dinucleotide step as A-like vs. B-like vs. TA-like. What is the specific test used by the algorithm?

I cannot seem to find this in the original 3DNA paper or on the website; I sincerely hope it's not hiding in plain site.

Title: Re: Criterion for Dinucleotide Step Being A-Like or B-Like
Post by: xiangjun on May 15, 2016, 08:46:28 pm

Check the thread "A-DNA definition (http://forum.x3dna.org/general-discussions/a-dna-definition/)".

HTH,

Xiang-Jun

Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University