By default this log will appear each time a molecule is loaded. This option can be disabled in the General Preferences dialog. /LOAD PDB log file for Z:\home\zhang\DATA\2012\NEW_DNA\3DNA\fb-raw.pdb /===================================================== /loading layer 0 Unrealistic B-factor: 0.00 for atom P of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom O1P of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom O2P of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom O5' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C5' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C4' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom O4' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C3' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom O3' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C2' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C1' of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom N9 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C8 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom N7 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C5 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C6 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom N6 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom N1 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C2 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom N3 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom C4 of A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom P of C 2 of chain 'A' Missing Atom: OP1 for residue A 1 of chain 'A' Missing Atom: OP2 for residue A 1 of chain 'A' Missing Atom: O2' for residue A 1 of chain 'A' Missing Atom: O2* for residue A 1 of chain 'A' Unrealistic B-factor: 0.00 for atom P of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom O1P of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom O2P of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom O5' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C5' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C4' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom O4' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C3' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom O3' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C2' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C1' of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom N1 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C2 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom O2 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom N3 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C4 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom N4 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C5 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom C6 of C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom P of G 3 of chain 'A' Missing Atom: OP1 for residue C 2 of chain 'A' Missing Atom: OP2 for residue C 2 of chain 'A' Missing Atom: O2' for residue C 2 of chain 'A' Missing Atom: O2* for residue C 2 of chain 'A' Unrealistic B-factor: 0.00 for atom P of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom O1P of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom O2P of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom O5' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C5' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C4' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom O4' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C3' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom O3' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C2' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C1' of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom N9 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C8 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom N7 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C5 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C6 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom O6 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom N1 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C2 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom N2 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom N3 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom C4 of G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom P of T 4 of chain 'A' Missing Atom: OP1 for residue G 3 of chain 'A' Missing Atom: OP2 for residue G 3 of chain 'A' Missing Atom: O2' for residue G 3 of chain 'A' Missing Atom: O2* for residue G 3 of chain 'A' Unrealistic B-factor: 0.00 for atom P of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O1P of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O2P of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O5' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C5' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C4' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O4' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C3' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O3' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C2' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C1' of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom N1 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C2 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O2 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom N3 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C4 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom O4 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C5 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C5M of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom C6 of T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom P of A 5 of chain 'B' Missing Atom: OP1 for residue T 4 of chain 'A' Missing Atom: OP2 for residue T 4 of chain 'A' Missing Atom: C7 for residue T 4 of chain 'A' Missing Atom: O2' for residue T 4 of chain 'A' Missing Atom: O2* for residue T 4 of chain 'A' Unrealistic B-factor: 0.00 for atom P of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom O1P of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom O2P of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom O5' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C5' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C4' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom O4' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C3' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom O3' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C2' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C1' of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom N9 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C8 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom N7 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C5 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C6 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom N6 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom N1 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C2 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom N3 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom C4 of A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom P of C 6 of chain 'B' Missing Atom: OP1 for residue A 5 of chain 'B' Missing Atom: OP2 for residue A 5 of chain 'B' Missing Atom: O2' for residue A 5 of chain 'B' Missing Atom: O2* for residue A 5 of chain 'B' Unrealistic B-factor: 0.00 for atom P of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom O1P of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom O2P of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom O5' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C5' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C4' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom O4' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C3' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom O3' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C2' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C1' of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom N1 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C2 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom O2 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom N3 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C4 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom N4 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C5 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom C6 of C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom P of G 7 of chain 'B' Missing Atom: OP1 for residue C 6 of chain 'B' Missing Atom: OP2 for residue C 6 of chain 'B' Missing Atom: O2' for residue C 6 of chain 'B' Missing Atom: O2* for residue C 6 of chain 'B' Unrealistic B-factor: 0.00 for atom P of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom O1P of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom O2P of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom O5' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C5' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C4' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom O4' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C3' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom O3' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C2' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C1' of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom N9 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C8 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom N7 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C5 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C6 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom O6 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom N1 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C2 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom N2 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom N3 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom C4 of G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom P of T 8 of chain 'B' Missing Atom: OP1 for residue G 7 of chain 'B' Missing Atom: OP2 for residue G 7 of chain 'B' Missing Atom: O2' for residue G 7 of chain 'B' Missing Atom: O2* for residue G 7 of chain 'B' Unrealistic B-factor: 0.00 for atom P of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O1P of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O2P of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O5' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C5' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C4' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O4' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C3' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O3' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C2' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C1' of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom N1 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C2 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O2 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom N3 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C4 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom O4 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C5 of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C5M of T 8 of chain 'B' Unrealistic B-factor: 0.00 for atom C6 of T 8 of chain 'B' Missing Atom: OP1 for residue T 8 of chain 'B' Missing Atom: OP2 for residue T 8 of chain 'B' Missing Atom: C7 for residue T 8 of chain 'B' Missing Atom: O2' for residue T 8 of chain 'B' Missing Atom: O2* for residue T 8 of chain 'B' /done loading layer 0:fb-raw /-------------------------------------------------------