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Hello
i'm an undergraduate student trying to have my degree in physics about "coarse grained model for nucleic acid". I used 3DNA package and i wanted to thank the creators of this tool first of all.
I would like to know if, using 3DNA, i can build very long DNA structures specifying only the length of the sequence and the quantities needed to do so. I need it to compare the statistical radial distributions i calculted on a set of real structures with an ideal set of structures with a very long sequence.
I hope you can answer me
Thank you
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Hi,
Welcome to the 3DNA community!
The program "fiber" is your friend to build long regular DNA models. Also check the topic on PDBML (http://http://3dna.rutgers.edu:8080/forum/viewtopic.php?t=9) in this forum.
HTH,
Xiang-Jun
Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.