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Questions and answers > General discussions (Q&As)
HADDOCK run could not be processed
xiangjun:
Thanks for your followup. However, it won't be fruitful to keep trying an unknown target. As mentioned in my previous response, you need to contact the HADDOCK developer to know exactly WHAT PDB format it needs.
At the very least, do you have any example PDB file that works with HADDOCK? I also suggested you try a DNA structure (e.g., 355d) downloaded from the RCSB PDB. The two PDB files I attached can be read without problems by Jmol/PyMOL.
Sorry, I cannot be of any further help other than what I've suggested above.
Xiang-Jun
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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.
