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Author Topic: Criterion for Dinucleotide Step Being A-Like or B-Like  (Read 4883 times)

Offline rwmolt

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Criterion for Dinucleotide Step Being A-Like or B-Like
« on: May 15, 2016, 08:08:15 pm »
I am having difficulty ascertaining the criterion used to classify a dinucleotide step as A-like vs. B-like vs. TA-like. What is the specific test used by the algorithm?

I cannot seem to find this in the original 3DNA paper or on the website; I sincerely hope it's not hiding in plain site.

Offline xiangjun

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Re: Criterion for Dinucleotide Step Being A-Like or B-Like
« Reply #1 on: May 15, 2016, 08:46:28 pm »
Check the thread "A-DNA definition".

HTH,

Xiang-Jun

 

Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.