Netiquette · Download · News · Gallery · Homepage · DSSR Manual · G-quadruplexes · DSSR-Jmol · DSSR-PyMOL · DSSR Licensing · Video Overview· RNA Covers

Author Topic: bash: find_pair: command not found  (Read 21113 times)

Offline Anju Sharma

  • with-posts
  • *
  • Posts: 5
    • View Profile
bash: find_pair: command not found
« on: May 16, 2007, 12:46:05 am »
Hello Sir,

While trying to convert my .pdb file to .inp i got following error. Please guide me how to overcome following problem. I'l b very thankful to you.

[root@amber bin]# set X3DNA /usr/local/X3DNA/X3DNA
[root@amber bin]# export PATH=$PATH:$X2DNA/bin
[root@amber bin]# echo $PATH
/usr/kerberos/sbin:/usr/kerberos/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/X11R6/bin:/root/bin:/usr/local/amber8:/usr/local/moe/bin:/bin
[root@amber bin]# find_pair -t /usr/local/Anju/try/atc.pdb /usr/local/Anju/try/atc.inp
bash: find_pair: command not found
[root@amber bin]# which find_pair
/usr/bin/which: no find_pair in (/usr/kerberos/sbin:/usr/kerberos/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/X11R6/bin:/root/bin:/usr/local/amber8:/usr/local/moe/bin:/bin)
[root@amber bin]#
Anju Sharma,
Project Fellow,
NIT, Hamirpur,
Himachal Pradesh (India)

 

Funded by the NIH R24GM153869 grant on X3DNA-DSSR, an NIGMS National Resource for Structural Bioinformatics of Nucleic Acids

Created and maintained by Dr. Xiang-Jun Lu, Department of Biological Sciences, Columbia University