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Questions and answers => General discussions (Q&As) => Topic started by: Anju Sharma on May 16, 2007, 12:46:05 am

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Title: bash: find_pair: command not found
Post by: Anju Sharma on May 16, 2007, 12:46:05 am
Hello Sir,

While trying to convert my .pdb file to .inp i got following error. Please guide me how to overcome following problem. I'l b very thankful to you.

[root@amber bin]# set X3DNA /usr/local/X3DNA/X3DNA
[root@amber bin]# export PATH=$PATH:$X2DNA/bin
[root@amber bin]# echo $PATH
/usr/kerberos/sbin:/usr/kerberos/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/X11R6/bin:/root/bin:/usr/local/amber8:/usr/local/moe/bin:/bin
[root@amber bin]# find_pair -t /usr/local/Anju/try/atc.pdb /usr/local/Anju/try/atc.inp
bash: find_pair: command not found
[root@amber bin]# which find_pair
/usr/bin/which: no find_pair in (/usr/kerberos/sbin:/usr/kerberos/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/X11R6/bin:/root/bin:/usr/local/amber8:/usr/local/moe/bin:/bin)
[root@amber bin]#

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The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.