snapshot1.pdb snapshot1.out 2 # duplex 50 # number of base-pairs 1 1 # explicit bp numbering/hetero atoms 1 100 0 # 1 | ...1>A:...1_:[DA5]A-**--T[DT3]:.100_:B<...1 7.69 1.21 34.43 7.68 10.83 2 99 0 # 2 | ...1>A:...2_:[.DG]G-----C[.DC]:..99_:B<...1 0.49 0.40 21.48 8.79 -2.64 3 98 0 # 3 | ...1>A:...3_:[.DT]T-----A[.DA]:..98_:B<...1 0.60 0.26 3.17 8.91 -3.72 4 97 0 # 4 | ...1>A:...4_:[.DC]C-----G[.DG]:..97_:B<...1 0.39 0.26 8.31 9.02 -3.68 5 96 0 # 5 | ...1>A:...5_:[.DC]C-----G[.DG]:..96_:B<...1 0.49 0.26 5.95 9.26 -3.69 6 95 0 # 6 | ...1>A:...6_:[.DA]A-----T[.DT]:..95_:B<...1 0.63 0.62 17.77 8.88 -2.24 7 94 0 # 7 | ...1>A:...7_:[.DA]A-----T[.DT]:..94_:B<...1 0.76 0.73 18.36 9.09 -1.85 8 93 0 # 8 | ...1>A:...8_:[.DA]A-----T[.DT]:..93_:B<...1 0.53 0.24 10.35 9.04 -3.47 9 92 0 # 9 | ...1>A:...9_:[.DC]C-----G[.DG]:..92_:B<...1 0.92 0.88 8.70 8.85 -1.88 10 91 0 # 10 | ...1>A:..10_:[.DG]G-----C[.DC]:..91_:B<...1 0.61 0.48 4.93 9.00 -3.19 11 90 0 # 11 | ...1>A:..11_:[.DA]A-----T[.DT]:..90_:B<...1 0.51 0.48 20.06 8.77 -2.52 12 89 0 # 12 | ...1>A:..12_:[.DC]C-----G[.DG]:..89_:B<...1 0.11 0.05 11.46 9.09 -4.22 13 88 0 # 13 | ...1>A:..13_:[.DA]A-----T[.DT]:..88_:B<...1 0.32 0.18 7.87 8.94 -3.93 14 87 0 # 14 | ...1>A:..14_:[.DA]A-----T[.DT]:..87_:B<...1 0.12 0.12 16.54 8.75 -3.82 15 86 0 # 15 | ...1>A:..15_:[.DG]G-----C[.DC]:..86_:B<...1 0.73 0.22 24.95 8.85 -2.58 16 85 0 # 16 | ...1>A:..16_:[.DG]G-----C[.DC]:..85_:B<...1 0.44 0.36 16.58 9.16 -3.02 17 84 0 # 17 | ...1>A:..17_:[.DG]G-----C[.DC]:..84_:B<...1 0.40 0.37 11.75 9.05 -3.26 18 83 0 # 18 | ...1>A:..18_:[.DA]A-----T[.DT]:..83_:B<...1 0.40 0.16 28.49 9.02 -2.86 19 82 0 # 19 | ...1>A:..19_:[.DC]C-----G[.DG]:..82_:B<...1 0.48 0.35 19.40 8.95 -2.85 20 81 0 # 20 | ...1>A:..20_:[.DC]C-----G[.DG]:..81_:B<...1 1.27 0.71 10.59 8.84 -1.77 21 80 0 # 21 | ...1>A:..21_:[.DG]G-----C[.DC]:..80_:B<...1 0.74 0.65 9.85 8.97 -2.47 22 79 0 # 22 | ...1>A:..22_:[.DC]C-----G[.DG]:..79_:B<...1 0.42 0.20 0.80 8.84 -4.13 23 78 0 # 23 | ...1>A:..23_:[.DA]A-----T[.DT]:..78_:B<...1 0.15 0.06 12.87 8.82 -4.08 24 77 0 # 24 | ...1>A:..24_:[.DG]G-----C[.DC]:..77_:B<...1 0.14 0.11 10.92 9.04 -4.10 25 76 0 # 25 | ...1>A:..25_:[.DC]C-----G[.DG]:..76_:B<...1 0.38 0.34 17.21 9.07 -3.08 26 75 0 # 26 | ...1>A:..26_:[.DT]T-----A[.DA]:..75_:B<...1 0.40 0.15 26.91 8.90 -2.95 27 74 0 # 27 | ...1>A:..27_:[.DC]C-----G[.DG]:..74_:B<...1 0.51 0.50 26.00 8.92 -2.20 28 73 0 # 28 | ...1>A:..28_:[.DG]G-----C[.DC]:..73_:B<...1 0.26 0.20 13.27 9.07 -3.68 29 72 0 # 29 | ...1>A:..29_:[.DT]T-----A[.DA]:..72_:B<...1 0.25 0.05 4.07 9.18 -4.44 30 71 0 # 30 | ...1>A:..30_:[.DC]C-----G[.DG]:..71_:B<...1 0.49 0.20 14.40 8.97 -3.39 31 70 0 # 31 | ...1>A:..31_:[.DT]T-----A[.DA]:..70_:B<...1 0.37 0.36 16.19 8.85 -3.09 32 69 0 # 32 | ...1>A:..32_:[.DC]C-----G[.DG]:..69_:B<...1 0.30 0.30 16.17 9.03 -3.29 33 68 0 # 33 | ...1>A:..33_:[.DT]T-----A[.DA]:..68_:B<...1 0.47 0.47 5.83 9.07 -3.31 34 67 0 # 34 | ...1>A:..34_:[.DA]A-----T[.DT]:..67_:B<...1 0.20 0.18 8.76 9.21 -4.00 35 66 0 # 35 | ...1>A:..35_:[.DC]C-----G[.DG]:..66_:B<...1 0.06 0.00 18.82 8.98 -3.99 36 65 0 # 36 | ...1>A:..36_:[.DG]G-----C[.DC]:..65_:B<...1 0.96 0.88 11.84 8.92 -1.69 37 64 0 # 37 | ...1>A:..37_:[.DA]A-----T[.DT]:..64_:B<...1 0.22 0.15 18.99 8.88 -3.54 38 63 0 # 38 | ...1>A:..38_:[.DC]C-----G[.DG]:..63_:B<...1 0.28 0.06 20.80 9.12 -3.56 39 62 0 # 39 | ...1>A:..39_:[.DA]A-----T[.DT]:..62_:B<...1 0.66 0.37 10.90 8.94 -3.05 40 61 0 # 40 | ...1>A:..40_:[.DG]G-----C[.DC]:..61_:B<...1 0.59 0.55 15.58 9.25 -2.54 41 60 0 # 41 | ...1>A:..41_:[.DC]C-----G[.DG]:..60_:B<...1 0.68 0.64 16.18 8.97 -2.24 42 59 0 # 42 | ...1>A:..42_:[.DA]A-----T[.DT]:..59_:B<...1 0.27 0.01 19.07 9.00 -3.76 43 58 0 # 43 | ...1>A:..43_:[.DC]C-----G[.DG]:..58_:B<...1 0.56 0.56 6.93 9.20 -2.96 44 57 0 # 44 | ...1>A:..44_:[.DG]G-----C[.DC]:..57_:B<...1 0.45 0.06 3.89 9.03 -4.24 45 56 0 # 45 | ...1>A:..45_:[.DC]C-----G[.DG]:..56_:B<...1 0.62 0.19 12.53 9.01 -3.38 46 55 0 # 46 | ...1>A:..46_:[.DG]G-----C[.DC]:..55_:B<...1 0.35 0.14 3.05 9.12 -4.22 47 54 0 # 47 | ...1>A:..47_:[.DG]G-----C[.DC]:..54_:B<...1 0.36 0.05 13.64 9.50 -3.85 48 53 0 # 48 | ...1>A:..48_:[.DG]G-----C[.DC]:..53_:B<...1 0.56 0.40 12.51 9.04 -3.02 49 52 0 # 49 | ...1>A:..49_:[.DG]G-----C[.DC]:..52_:B<...1 1.06 1.06 30.93 9.10 -0.28 50 51 0 # 50 | ...1>A:..50_:[DG3]G-----C[DC5]:..51_:B<...1 0.05 0.01 21.65 9.00 -3.86 ##### Base-pair criteria used: 4.00 0.00 15.00 2.50 65.00 4.50 7.80 [ O N] ##### 1 non-Watson-Crick base-pair, and 1 helix (0 isolated bps) ##### Helix #1 (50): 1 - 50