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General discussions (Q&As)


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[1] relationship between the two base-pair coordinate frames

[2] Rebuild with backbone from single-stranded .par file

[3] installation error in MAC

[4] Can the v2.4 x3DNA(mut_base)mutate more than one base at multiple sites of RNA

[5] 3DNA manual

[6] How to setup 3DNA

[7] MOVED: Color each block nucleotide at each locations

[8] MOVED: Stacking interactions in G-quadruplexes

[9] The definition of glycoside conformation of guanine nucleotide in nucleic acid


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Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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