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General discussions (Q&As)


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[1] Clarification on Rebuilding Reference Frames from the Middle Frame

[2] x3dna-v2.3 no backbone ribbon

[3] Add C or T to 5' end of an RNA bound to QKI PDB file

[4] Classifying structures into A, B , AB, TA .. types

[5] Shift and Tilt values of Z-DNA : 3DNA and Curves+

[6] 'find_pair' and 'analyze' with pdb files of unbound base pairs

[7] build a DNA triangle for Gromacs

[8] How to calculate DNA bending angles in protein/DNA complex

[9] How to view triplex DNA with designed sequence via X3DNA?


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Created and maintained by Dr. Xiang-Jun Lu [律祥俊], Principal Investigator of the NIH grant R01GM096889
Dr. Lu is currently affiliated with the Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.

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