3DNA Forum

Questions and answers => RNA structures (DSSR) => Topic started by: ikram_RNA on April 30, 2021, 09:39:00 am

Netiquette · Download · News · Gallery · Homepage · DSSR Manual · G-quadruplexes · DSSR-Jmol · DSSR-PyMOL · DSSR Licensing · Video Overview· RNA Covers

Title: X3DNA and cif
Post by: ikram_RNA on April 30, 2021, 09:39:00 am
Hello,

First i would like to thank you for all your efforts,

I'm a PhD student in proteins RNA interaction this way i'm trying to use the X3DNA in my project. However it not take the cif file and since all the new structures now have the cif format, is there anyway to deal with that problem?

Thanks
Title: Re: X3DNA and cif
Post by: xiangjun on April 30, 2021, 10:30:53 am
Hi,

3DNA has been completely superseded by DSSR (Pro) which handles PDBx/mmCIF format. 3DNA is the past and no longer supported.

See the video overview of DSSR (http://docs.x3dna.org/dssr-overview/).

Best regards,

Xiang-Jun

Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.