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load =1ehz/dssr
select nucleic; display nucleic
rotate best; rotate z 90
cartoon only
set cartoonsteps on
set cartoonblocks off
set antialiasdisplay on
set fontSize 4
background white; color grey
select nucleic and leadAtom; spacefill 1.5
label %[group1]; set labeloffset 0 0; color labels yellow
select junctions; color red
select selected and *.P; label %n%r; color label black; set labeloffset 0 0; set labelfront;
select @{_M.dssr.nts.select("where is_modified")} and *.P; color label blue
load =5ktj/dssr
cartoon only
select nts; display nts
set cartoonsteps off
set cartoonblocks off
set antialiasdisplay on
background white; color grey
select within(dssr, "helices..2"); color red; cpk
rotate best; rotate z -90; rotate y 90
load =4fe5/dssr
select nts; display nts
rotate best; rotate z 90; rotate y 50
cartoon only
set cartoonsteps off
set cartoonblocks on
set antialiasdisplay on
background white; color grey
select within(dssr, "junctions..1"); color nucleic
select within(dssr, "junctions..2"); color red
select HPA; cpk; color cpk
load =1d66/dssr
cartoon only
set cartoonsteps off
set cartoonblocks off
set antialiasdisplay on
background white; color grey
color property DSSR stems
select protein; color TRANSLUCENT 0.9 brown
load 1fjg.pdb
calculate structure dssr
cartoon only
select nts; display nts
rotate best
set cartoonsteps on
set cartoonblocks off
set antialiasdisplay on
background white; color monomer
Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.