Netiquette · Download · News · Gallery · Homepage · DSSR Manual · G-quadruplexes · DSSR-Jmol · DSSR-PyMOL · DSSR Licensing · Video Overview· RNA Covers

Welcome > Bug reports

x3dna-dssp error in X86_64 system

(1/1)

liushiyong@gmail.com:
[shiyong@login RNA]$ uname -a
Linux  2.6.9-103.ELsmp #1 SMP Fri Dec 9 04:43:08 EST 2011 x86_64 x86_64 x86_64 GNU/Linux
[shiyong@login RNA]$ ./x3dna-dssr -h
Floating point exception
[shiyong@login RNA]$

xiangjun:
Thanks for the report. The current DSSR Linux 64-bit version was compiled on SBGrid CentOS 5 (x86_64), with the following configurations:


--- Quote ---uname -a
Linux sbgrid-c5b-64 2.6.18-194.17.1.el5 #1 SMP Wed Sep 29 12:50:31 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux
--- End quote ---

So far, yours is the first reported case with such a problem. Your Linux kernel 2.6.9-103.ELsmp is lower than 2.6.18, which is likely the reason for the "Floating point exception". Could you please let me know which specific Linux distribution are you using? Do you have access to a more updated Linux machine?

Xiang-Jun

Navigation

[0] Message Index

Created and maintained by Dr. Xiang-Jun Lu [律祥俊] (xiangjun@x3dna.org)
The Bussemaker Laboratory at the Department of Biological Sciences, Columbia University.